com.openinventor.imageviz.engines.imageanalysis.morphometry

Class SoAverageObjectAreaPerSliceQuantification3d

java.lang.Object

com.openinventor.inventor.Inventor

com.openinventor.inventor.misc.SoBase

com.openinventor.inventor.fields.SoFieldContainer

com.openinventor.inventor.engines.SoEngine

com.openinventor.imageviz.engines.SoImageVizEngine

com.openinventor.imageviz.engines.imageanalysis.morphometry.SoAverageObjectAreaPerSliceQuantification3d

All Implemented Interfaces:

SafeDisposable

public class SoAverageObjectAreaPerSliceQuantification3d
extends SoImageVizEngine

SoAverageObjectAreaPerSliceQuantification3d engine The SoAverageObjectAreaPerSliceQuantification3d engine computes the average objects area along image planes.

For an introduction, see section Morphometry.

This engine computes the average objects area along image planes. It can be used as an indicator of connectivity since great number of small objects along image planes may result in high fragmentation ratio. On the other hand, a small number of objects with large area along image planes may lead to high connectivity. See also:

SoTotalImageBoundaryAreaQuantification.

File format/default:

AverageObjectAreaPerSliceQuantification3d {

inObjectImage	NULL
inMaskImage	NULL

}

Library references: average_object_area_per_slice

Nested Class Summary

Nested Classes

Modifier and Type	Class and Description
static class	SoAverageObjectAreaPerSliceQuantification3d.SbAverageObjectAreaPerSliceDetail Results details of average object area per slice global measure.

Nested classes/interfaces inherited from class com.openinventor.imageviz.engines.SoImageVizEngine

SoImageVizEngine.ComputeModes, SoImageVizEngine.EventArg, SoImageVizEngine.Neighborhood3ds

Nested classes/interfaces inherited from class com.openinventor.inventor.Inventor

Inventor.ConstructorCommand

Field Summary

Fields

Modifier and Type	Field and Description
SoSFImageDataAdapter	inMaskImage The binary image for the mask or empty (command looks for only inside).
SoSFImageDataAdapter	inObjectImage The input 3D binary image.
SoImageVizEngineAnalysisOutput<SoAverageObjectAreaPerSliceQuantification3d.SbAverageObjectAreaPerSliceDetail>	outResult The output measure result.

Fields inherited from class com.openinventor.imageviz.engines.SoImageVizEngine

CONNECTIVITY_18, CONNECTIVITY_26, CONNECTIVITY_6, MODE_2D, MODE_3D, MODE_AUTO, onBegin, onEnd, onProgress

Fields inherited from class com.openinventor.inventor.Inventor

VERBOSE_LEVEL, ZeroHandle

Constructor Summary

Constructors

Constructor and Description
SoAverageObjectAreaPerSliceQuantification3d() Constructor.

Method Summary

Methods inherited from class com.openinventor.imageviz.engines.SoImageVizEngine

abortEvaluate, isEvaluating, startEvaluate, waitEvaluate

Methods inherited from class com.openinventor.inventor.engines.SoEngine

copy, getByName, getOutput, getOutputName

Methods inherited from class com.openinventor.inventor.fields.SoFieldContainer

copyFieldValues, copyFieldValues, enableNotify, fieldsAreEqual, get, getAllFields, getEventIn, getEventOut, getField, getFieldName, hasDefaultValues, isNotifyEnabled, set, setToDefaults

Methods inherited from class com.openinventor.inventor.misc.SoBase

dispose, getEXTERNPROTO, getName, getPROTO, isDisposable, isSynchronizable, setName, setSynchronizable, touch

Methods inherited from class com.openinventor.inventor.Inventor

getAddress, getNativeResourceHandle, startInternalThreads, stopInternalThreads

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

inObjectImage

public final SoSFImageDataAdapter inObjectImage

The input 3D binary image. Default value is NULL. Supported types include: binary image.

inMaskImage

public final SoSFImageDataAdapter inMaskImage

The binary image for the mask or empty (command looks for only inside). This parameter is optional. Default value is NULL. Supported types include: binary image.

outResult

public final SoImageVizEngineAnalysisOutput<SoAverageObjectAreaPerSliceQuantification3d.SbAverageObjectAreaPerSliceDetail> outResult

The output measure result. Default value is NULL.

Constructor Detail

SoAverageObjectAreaPerSliceQuantification3d

public SoAverageObjectAreaPerSliceQuantification3d()

Constructor.